openmmtools.integrators.ExternalPerturbationLangevinIntegrator ============================================================== .. currentmodule:: openmmtools.integrators .. autoclass:: ExternalPerturbationLangevinIntegrator .. automethod:: __init__ .. rubric:: Methods .. autosummary:: ~ExternalPerturbationLangevinIntegrator.__init__ ~ExternalPerturbationLangevinIntegrator.addComputeGlobal ~ExternalPerturbationLangevinIntegrator.addComputePerDof ~ExternalPerturbationLangevinIntegrator.addComputeSum ~ExternalPerturbationLangevinIntegrator.addComputeTemperatureDependentConstants ~ExternalPerturbationLangevinIntegrator.addConstrainPositions ~ExternalPerturbationLangevinIntegrator.addConstrainVelocities ~ExternalPerturbationLangevinIntegrator.addGlobalVariable ~ExternalPerturbationLangevinIntegrator.addPerDofVariable ~ExternalPerturbationLangevinIntegrator.addTabulatedFunction ~ExternalPerturbationLangevinIntegrator.addUpdateContextState ~ExternalPerturbationLangevinIntegrator.beginIfBlock ~ExternalPerturbationLangevinIntegrator.beginWhileBlock ~ExternalPerturbationLangevinIntegrator.deserialize_xml ~ExternalPerturbationLangevinIntegrator.endBlock ~ExternalPerturbationLangevinIntegrator.getComputationStep ~ExternalPerturbationLangevinIntegrator.getConstraintTolerance ~ExternalPerturbationLangevinIntegrator.getGlobalVariable ~ExternalPerturbationLangevinIntegrator.getGlobalVariableByName ~ExternalPerturbationLangevinIntegrator.getGlobalVariableName ~ExternalPerturbationLangevinIntegrator.getIntegrationForceGroups ~ExternalPerturbationLangevinIntegrator.getKineticEnergyExpression ~ExternalPerturbationLangevinIntegrator.getNumComputations ~ExternalPerturbationLangevinIntegrator.getNumGlobalVariables ~ExternalPerturbationLangevinIntegrator.getNumPerDofVariables ~ExternalPerturbationLangevinIntegrator.getNumTabulatedFunctions ~ExternalPerturbationLangevinIntegrator.getPerDofVariable ~ExternalPerturbationLangevinIntegrator.getPerDofVariableByName ~ExternalPerturbationLangevinIntegrator.getPerDofVariableName ~ExternalPerturbationLangevinIntegrator.getRandomNumberSeed ~ExternalPerturbationLangevinIntegrator.getStepSize ~ExternalPerturbationLangevinIntegrator.getTabulatedFunction ~ExternalPerturbationLangevinIntegrator.getTabulatedFunctionName ~ExternalPerturbationLangevinIntegrator.getTemperature ~ExternalPerturbationLangevinIntegrator.get_acceptance_rate ~ExternalPerturbationLangevinIntegrator.get_heat ~ExternalPerturbationLangevinIntegrator.get_protocol_work ~ExternalPerturbationLangevinIntegrator.get_shadow_work ~ExternalPerturbationLangevinIntegrator.get_total_work ~ExternalPerturbationLangevinIntegrator.is_restorable ~ExternalPerturbationLangevinIntegrator.is_thermostated ~ExternalPerturbationLangevinIntegrator.pretty_format ~ExternalPerturbationLangevinIntegrator.pretty_print ~ExternalPerturbationLangevinIntegrator.reset ~ExternalPerturbationLangevinIntegrator.reset_ghmc_statistics ~ExternalPerturbationLangevinIntegrator.reset_heat ~ExternalPerturbationLangevinIntegrator.reset_protocol_work ~ExternalPerturbationLangevinIntegrator.reset_shadow_work ~ExternalPerturbationLangevinIntegrator.restore_interface ~ExternalPerturbationLangevinIntegrator.setConstraintTolerance ~ExternalPerturbationLangevinIntegrator.setGlobalVariable ~ExternalPerturbationLangevinIntegrator.setGlobalVariableByName ~ExternalPerturbationLangevinIntegrator.setIntegrationForceGroups ~ExternalPerturbationLangevinIntegrator.setKineticEnergyExpression ~ExternalPerturbationLangevinIntegrator.setPerDofVariable ~ExternalPerturbationLangevinIntegrator.setPerDofVariableByName ~ExternalPerturbationLangevinIntegrator.setRandomNumberSeed ~ExternalPerturbationLangevinIntegrator.setStepSize ~ExternalPerturbationLangevinIntegrator.setTemperature ~ExternalPerturbationLangevinIntegrator.step .. rubric:: Attributes .. autosummary:: ~ExternalPerturbationLangevinIntegrator.BlockEnd ~ExternalPerturbationLangevinIntegrator.ComputeGlobal ~ExternalPerturbationLangevinIntegrator.ComputePerDof ~ExternalPerturbationLangevinIntegrator.ComputeSum ~ExternalPerturbationLangevinIntegrator.ConstrainPositions ~ExternalPerturbationLangevinIntegrator.ConstrainVelocities ~ExternalPerturbationLangevinIntegrator.IfBlockStart ~ExternalPerturbationLangevinIntegrator.UpdateContextState ~ExternalPerturbationLangevinIntegrator.WhileBlockStart ~ExternalPerturbationLangevinIntegrator.acceptance_rate ~ExternalPerturbationLangevinIntegrator.global_variable_names ~ExternalPerturbationLangevinIntegrator.heat ~ExternalPerturbationLangevinIntegrator.is_metropolized ~ExternalPerturbationLangevinIntegrator.kT ~ExternalPerturbationLangevinIntegrator.protocol_work ~ExternalPerturbationLangevinIntegrator.shadow_work ~ExternalPerturbationLangevinIntegrator.thisown ~ExternalPerturbationLangevinIntegrator.total_work