openmmtools.multistate.ParallelTemperingAnalyzer
================================================

.. currentmodule:: openmmtools.multistate

.. autoclass:: ParallelTemperingAnalyzer

   
   .. automethod:: __init__

   
   .. rubric:: Methods

   .. autosummary::
   
      ~ParallelTemperingAnalyzer.__init__
      ~ParallelTemperingAnalyzer.clear
      ~ParallelTemperingAnalyzer.generate_mixing_statistics
      ~ParallelTemperingAnalyzer.get_effective_energy_timeseries
      ~ParallelTemperingAnalyzer.get_enthalpy
      ~ParallelTemperingAnalyzer.get_entropy
      ~ParallelTemperingAnalyzer.get_free_energy
      ~ParallelTemperingAnalyzer.read_energies
      ~ParallelTemperingAnalyzer.read_logZ
      ~ParallelTemperingAnalyzer.read_log_weights
      ~ParallelTemperingAnalyzer.reformat_energies_for_mbar
      ~ParallelTemperingAnalyzer.show_mixing_statistics
   
   

   
   
   .. rubric:: Attributes

   .. autosummary::
   
      ~ParallelTemperingAnalyzer.effective_length
      ~ParallelTemperingAnalyzer.has_log_weights
      ~ParallelTemperingAnalyzer.kT
      ~ParallelTemperingAnalyzer.max_n_iterations
      ~ParallelTemperingAnalyzer.mbar
      ~ParallelTemperingAnalyzer.n_equilibration_iterations
      ~ParallelTemperingAnalyzer.n_iterations
      ~ParallelTemperingAnalyzer.n_replicas
      ~ParallelTemperingAnalyzer.n_states
      ~ParallelTemperingAnalyzer.name
      ~ParallelTemperingAnalyzer.observables
      ~ParallelTemperingAnalyzer.reference_states
      ~ParallelTemperingAnalyzer.reporter
      ~ParallelTemperingAnalyzer.restraint_distance_cutoff
      ~ParallelTemperingAnalyzer.restraint_energy_cutoff
      ~ParallelTemperingAnalyzer.statistical_inefficiency
      ~ParallelTemperingAnalyzer.unbias_restraint
      ~ParallelTemperingAnalyzer.use_full_trajectory
      ~ParallelTemperingAnalyzer.use_online_data